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INRA
24, chemin de Borde Rouge –Auzeville – CS52627
31326 Castanet Tolosan CEDEX - France

Dernière mise à jour : Mai 2018

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The Biological Resource Centre for the Environment (BRC4Env)

Microorganisms

Here we present productions based on resources from microorganisms distributed by the Thonon Culture Collections

Lefrançois, E., Apothéloz-Perret-Gentil, L., Blancher, P., Botreau, S., Chardon, C., Crepin, L., Cordier T., Cordonier A., Domaizon I., Ferrari B.J.D., Guéguen J., Hustache J.C., Jacas L., Jacquet S., Lacroix S., Mazenq A.L., Pawlowska A., Perney P., Pawlowski J., Rimet F., Rubin J.F., Trevisan D., Vivien R., Bouchez A., 2018. Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program. Environmental Science and Pollution Research, 1–9. DOI:10.1007/s11356-018-2172-2

Esteves S. M., Almeida S. F. P., Gonçalves S., Rimet F., Bouchez A., Figueira E., 2018. Sensitive vs. tolerant Nitzschia palea (Kützing) W. Smith strains to atrazine: a biochemical perspective. Ecotoxicology, 27(7): 860-870. DOI: 10.1007/s10646-018-1953-1

Rimet F., Abarca N., Bouchez A., Kusber W.H., Jahn R., Kahlert M., Keck F., Kelly M.G., Mann D.G., Piuz A., Trobajo R., Tapolczai K., Vasselon V., Zimmermann J., 2018. The potential of High-Throughput Sequencing (HTS) of natural samples as a source of primary taxonomic information for reference libraries of diatom barcodes. Fottea, Olomouc, 18(1): 37–54. DOI: 10.5507/fot.2017.013

Vasselon V., Bouchez A., Rimet F., Jacquet S., Trobajo R., Corniquel M., Tapolczai K., Domaizon I., 2018. Avoiding quantification bias in metabarcoding: Application of a cell biovolume correction factor in diatom molecular biomonitoring. Methods in Ecology and Evolution, 2018: 1-10. DOI: 10.1111/2041-210X.12960

Sara M. Esteves, François Keck, Salomé F. P. Almeida, Etelvina Figueira, Agnès Bouchez, Frédéric Rimet. 2017. Can we predict diatoms herbicide sensitivities with phylogeny? Influence of intraspecific and interspecific variability. Ecotoxicology, 26(8): 1065-1077, DOI 10.1007/s10646-017-1834-z

Vasselon V., Domaizon I., Rimet F., Kahlert M., Bouchez A., 2017. Application of high-throughput sequencing (HTS) metabarcoding to diatom biomonitoring: do DNA extraction methods matter? Freshwater Science 36: 162-177.

Ács E., Ari E., Duleba M., Dressler M., Genkal S.I., Jakó E., Rimet F., Ector L. & Kiss K.T., 2016. Pantocsekiella, a new centric diatom genus based on morphological and genetic studies. Fottea, 16: 56-78.

Rimet F., Chaumeil P., Keck F., Kermarrec L., Vasselon V., Kahlert M., Franc A & Bouchez A., 2016. R-Syst::diatom: An open-access and curated barcode database for diatoms and freshwater monitoring. Database: The Journal of Biological Databases and Curation, 2016, 1-21